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Effective method for detecting error causes from incoherent biological ontologies

Yu Zhang1,2,3, Haitao Wu1,2, Jinfeng Gao1,2, Yongtao Zhang4, Ruxian Yao1,2, Yuxiang Zhu1,2

                1 College of Information Engineering, Huanghuai University, Zhumadian, Henan 463000, China

                2 Henan Key Laboratory of Smart Lighting, Zhumadian, Henan 463000, China

                3 Henan Joint International Research Laboratory of Behavior Optimization Control for Smart Robots, Zhumadian, Henan 463000, China

                4 Department of Information and Electronic Engineering, Shangqiu Institute of Technology, Shangqiu, Henan 476000, China
Overview
Environment
Software
Contact

Overview

The web server is developed to provide detailed information on the experiments. The reason is that some experiments are not described in the paper owing to the space limitation. The readers can click Experimental Results to download the experimental results. The experimental environment and software websites used in the experiments are provided below. The source codes of the algorithms is also provided and are available to download.

Experimental Environment

All experiments were performed on laptop with 1.60 GHz Intel Core i5 CPU and 16 GB of main memory. The algorithms are implemented in Java by using the OWL API for ontology loading and manipulation and Pellet reasoner for satisfiability checking.

Software

The experiments are conducted using Pellet version 2.3.1. The OWLAPI version 3.4.3 is used for ontology loading and manipulation. The OWL API can support the manipulation of ontologies at the level of axioms and is thus suited for the implementation of the MUPS computing algorithms.

Contact

This server is developed and maintained by the author, Yu Zhang. The server is used to provide detailed information on the experiments, including the dataset, source codes and supplementary information. If any problems are found on the server, then contact the author.

Email: zhangyujlu@163.com

Version: 1.0

Date: 2021/11

This server is designed and implemented by the author, Yu Zhang (2020.06)
The server is still on its infancy. Contact the web manager for any questions.